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KAOT1_17828 protein (Kordia algicida) - STRING interaction network
"KAOT1_17828" - ABC transporter, ATP-binding protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_17828ABC transporter, ATP-binding protein (556 aa)    
Predicted Functional Partners:
KAOT1_13557
Oligopeptide ABC transporter, permease (369 aa)
 
  0.959
KAOT1_10506
Dipeptide ABC transporter, permease component (358 aa)
  0.940
KAOT1_08764
Oligopeptide ABC transporter, solute-binding protein (538 aa)
 
 
  0.933
KAOT1_19587
Peptidase T2, asparaginase 2 (309 aa)
 
   
  0.597
KAOT1_17208
Asparaginase family protein (346 aa)
 
   
  0.597
KAOT1_09926
Twin-arginine translocation pathway signal (337 aa)
 
   
  0.597
KAOT1_17823
Uncharacterized protein (63 aa)
              0.576
KAOT1_08934
Probable oxidoreductase (972 aa)
       
    0.470
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (340 aa)
       
    0.468
KAOT1_17818
Polyketide synthase (519 aa)
              0.409
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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