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KAOT1_18022 protein (Kordia algicida) - STRING interaction network
"KAOT1_18022" - Uncharacterized membrane protein in Kordia algicida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_18022Uncharacterized membrane protein (156 aa)    
Predicted Functional Partners:
KAOT1_18013
Na+-driven multidrug efflux pump (247 aa)
 
          0.976
KAOT1_05127
tRNA modification GTPase TrmE (317 aa)
       
      0.521
KAOT1_18092
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase (247 aa)
     
    0.431
KAOT1_17703
1-acyl-sn-glycerol-3-phosphate acyltransferase (248 aa)
     
    0.431
KAOT1_01370
Uncharacterized protein (185 aa)
     
    0.431
infB
Translation initiation factor IF-2 ; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (938 aa)
   
        0.408
rbfA
Ribosome-binding factor A ; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (133 aa)
   
        0.408
KAOT1_10096
Uncharacterized protein (337 aa)
   
        0.408
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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