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KAOT1_18082 protein (Kordia algicida) - STRING interaction network
"KAOT1_18082" - Transcriptional regulator in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_18082Transcriptional regulator (289 aa)    
Predicted Functional Partners:
KAOT1_01080
Hypothetical transcriptional regulator, AraC family protein (341 aa)
   
          0.673
KAOT1_01015
Two-component system sensor histidine kinase/response regulator, hybrid (’one component system’) (342 aa)
   
          0.659
KAOT1_01075
Transcriptional regulator (347 aa)
   
          0.645
KAOT1_20192
Transcriptional regulatory protein (345 aa)
   
          0.617
KAOT1_18077
Uncharacterized protein (198 aa)
              0.559
KAOT1_17998
Coproporphyrinogen III oxidase (295 aa)
   
        0.553
KAOT1_04852
Transcriptional regulator, AraC family protein (281 aa)
   
          0.497
KAOT1_14107
Transcriptional regulator (281 aa)
   
          0.444
KAOT1_06907
Uncharacterized protein (194 aa)
   
          0.434
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (205 aa)
 
            0.411
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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