STRINGSTRING
KAOT1_18117 protein (Kordia algicida) - STRING interaction network
"KAOT1_18117" - Putative carboxy-terminal protease in Kordia algicida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_18117Putative carboxy-terminal protease (532 aa)    
Predicted Functional Partners:
KAOT1_18112
Deoxycytidylate deaminase (144 aa)
              0.883
KAOT1_05942
Putative peptidase (318 aa)
 
 
  0.695
KAOT1_15748
Peptidase, M23/M37 family protein (431 aa)
 
 
  0.667
KAOT1_18107
Uncharacterized protein (193 aa)
              0.651
KAOT1_20452
Uncharacterized protein (324 aa)
 
 
  0.646
KAOT1_02927
Uncharacterized protein (566 aa)
 
 
  0.595
KAOT1_18092
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase (247 aa)
   
        0.536
KAOT1_08478
HtrA protein (473 aa)
   
   
  0.530
KAOT1_02251
Serine protease (516 aa)
   
   
  0.530
KAOT1_02812
Ribosomal RNA small subunit methyltransferase E ; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (235 aa)
 
          0.514
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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