STRINGSTRING
KAOT1_18642 protein (Kordia algicida) - STRING interaction network
"KAOT1_18642" - Uncharacterized protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_18642Uncharacterized protein (320 aa)    
Predicted Functional Partners:
KAOT1_15708
Uncharacterized protein (925 aa)
 
          0.793
KAOT1_13162
Uncharacterized protein (249 aa)
   
          0.665
hflX
GTP-binding protein HflX ; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (413 aa)
              0.660
KAOT1_18137
Uncharacterized protein (189 aa)
   
          0.658
KAOT1_18637
CHU large protein uncharacterized (1421 aa)
              0.604
KAOT1_10361
Uncharacterized protein (137 aa)
   
          0.596
KAOT1_14562
Uncharacterized protein (93 aa)
 
          0.584
KAOT1_10961
Uncharacterized protein (49 aa)
   
          0.540
KAOT1_05472
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (473 aa)
   
          0.506
KAOT1_15738
Putative TonB-dependent outer membrane receptor protein (913 aa)
 
          0.503
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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