STRINGSTRING
KAOT1_19477 protein (Kordia algicida) - STRING interaction network
"KAOT1_19477" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_19477Uncharacterized protein (517 aa)    
Predicted Functional Partners:
KAOT1_19487
Uncharacterized protein (445 aa)
 
          0.968
KAOT1_19482
Putative ABC transporter ATP-binding protein (703 aa)
 
          0.967
KAOT1_19467
Uncharacterized protein (414 aa)
 
          0.878
KAOT1_19472
Uncharacterized protein (172 aa)
              0.859
KAOT1_07943
Histidyl-tRNA synthetase (156 aa)
   
          0.674
KAOT1_15578
Outer membrane protein (526 aa)
   
          0.605
cas9
CRISPR-associated endonuclease Cas9 ; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this pro [...] (1391 aa)
   
          0.579
KAOT1_08679
Uncharacterized protein (301 aa)
   
          0.531
KAOT1_19797
Uncharacterized protein (235 aa)
   
          0.492
KAOT1_18692
Uncharacterized protein (171 aa)
   
          0.443
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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