STRINGSTRING
KAOT1_19747 protein (Kordia algicida) - STRING interaction network
"KAOT1_19747" - Uncharacterized protein in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_19747Uncharacterized protein (108 aa)    
Predicted Functional Partners:
KAOT1_19752
TonB (238 aa)
 
          0.814
KAOT1_18247
Uncharacterized protein (119 aa)
   
          0.736
KAOT1_16103
Uncharacterized protein (378 aa)
   
          0.724
gcvH
Glycine cleavage system H protein ; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (126 aa)
              0.694
KAOT1_01150
Uncharacterized protein (578 aa)
   
          0.613
KAOT1_19757
TonB (267 aa)
 
          0.594
KAOT1_07037
Uncharacterized protein (103 aa)
   
          0.591
KAOT1_08523
Uncharacterized protein (102 aa)
   
          0.572
KAOT1_02682
Nucleoid-associated protein KAOT1_02682 ; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (107 aa)
   
          0.560
KAOT1_05402
Uncharacterized protein (90 aa)
   
          0.551
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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