STRINGSTRING
KAOT1_19802 protein (Kordia algicida) - STRING interaction network
"KAOT1_19802" - YpmQ in Kordia algicida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_19802YpmQ (233 aa)    
Predicted Functional Partners:
KAOT1_19807
Uncharacterized protein (186 aa)
          0.972
KAOT1_19797
Uncharacterized protein (235 aa)
 
          0.909
KAOT1_19812
Uncharacterized protein (77 aa)
              0.885
ctaB
Heme O synthase ; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (323 aa)
 
   
  0.791
KAOT1_19787
Cytochrome c oxidase, subunit III (361 aa)
 
     
  0.755
KAOT1_19697
Heme/copper-type cytochrome/quinol oxidase, subunit 2 (359 aa)
 
 
 
  0.717
KAOT1_19792
Uncharacterized protein (132 aa)
 
          0.706
KAOT1_19782
Cytochrome c oxidase, subunit III (193 aa)
 
          0.686
KAOT1_09286
Thioredoxin family protein (333 aa)
 
 
  0.666
KAOT1_09291
Thioredoxin family protein (447 aa)
 
 
  0.654
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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