STRINGSTRING
KAOT1_19927 protein (Kordia algicida) - STRING interaction network
"KAOT1_19927" - Uncharacterized protein in Kordia algicida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KAOT1_19927Uncharacterized protein (377 aa)    
Predicted Functional Partners:
KAOT1_19932
Uncharacterized protein (167 aa)
 
          0.951
KAOT1_19922
Uncharacterized protein (118 aa)
              0.859
KAOT1_19937
Transcriptional regulator, sigma-54-related protein (418 aa)
              0.810
KAOT1_19942
Uncharacterized protein (328 aa)
              0.756
miaB
tRNA-i(6)A37 methylthiotransferase ; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (481 aa)
              0.750
KAOT1_05167
Uncharacterized protein (75 aa)
   
          0.707
KAOT1_16768
Uncharacterized protein (1141 aa)
   
          0.698
KAOT1_22291
Uncharacterized protein (130 aa)
   
          0.697
KAOT1_20872
Probable extracellular nuclease (1581 aa)
   
          0.666
KAOT1_13382
Uncharacterized protein (504 aa)
   
          0.664
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida, K. algicida OT-1, Kordia, Kordia Sohn et al. 2004, Kordia algicida, Kordia algicida OT-1, Kordia algicida Sohn et al. 2004, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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