STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP95634.1Phosphatidylserine decarboxylase; COG0642 Signal transduction histidine kinase. (727 aa)    
Predicted Functional Partners:
EDP94609.1
COG3321 Polyketide synthase modules and related proteins; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.999
EDP94610.1
COG3321 Polyketide synthase modules and related proteins.
   
 0.999
EDP95497.1
COG0642 Signal transduction histidine kinase.
0.999
EDP95498.1
COG0642 Signal transduction histidine kinase.
0.999
EDP98159.1
COG0642 Signal transduction histidine kinase.
 
0.999
EDP96943.1
Multi-sensor signal transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
0.999
EDP95633.1
Hybrid sensory kinase; COG0642 Signal transduction histidine kinase.
 
 
0.986
EDP94627.1
Sensor histidine kinase.
 
0.979
EDP97352.1
COG0642 Signal transduction histidine kinase.
 
0.975
EDP96230.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
 0.972
Your Current Organism:
Kordia algicida
NCBI taxonomy Id: 391587
Other names: K. algicida OT-1, Kordia algicida NBRC 10036, Kordia algicida OT-1, Kordia algicida str. OT-1, Kordia algicida strain OT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.