STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEI92303.1Heme peroxidase-like protein. (520 aa)    
Predicted Functional Partners:
AEI95595.1
Hypothetical protein; Containing a DnaJ domain.
 
 
   0.569
AEI92548.1
Hypothetical protein.
  
     0.516
dmgdh3
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
     0.501
AEI92304.1
Hypothetical protein.
       0.487
AEI95481.1
Putative alpha/beta hydrolase of unknown function DUF900.
  
     0.477
AEI96007.1
Hypothetical protein.
 
     0.470
AEI92095.1
Methyltransferase-like protein.
  
     0.429
AEI95630.1
Hypothetical protein; Associated with flagellar biosynthesis.
  
 
 0.424
AEI96259.1
Flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.422
AEI95419.1
Putative zinc-dependent metallopeptidase.
 
 
 0.421
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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