STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpD1Aerobic glycerol-3-phosphate dehydrogenase GlpD; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (499 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 0.995
AEI92859.1
Putative carbohydrate kinase, FGGY family; Belongs to the FGGY kinase family.
 
  
 0.897
AEI92866.1
Hypothetical protein.
 
   
 0.836
AEI92864.1
Xylulose kinase-like protein.
  
  
 0.817
fucA
L-fuculose phosphate aldolase FucA.
  
  
 0.795
AEI92857.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 0.789
AEI92858.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 0.789
AEI92860.1
Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.789
AEI92856.1
Putative ABC transporter permease protein.
       0.784
AEI92863.1
Hypothetical protein.
       0.784
Your Current Organism:
Roseobacter litoralis
NCBI taxonomy Id: 391595
Other names: R. litoralis Och 149, Roseobacter litoralis Och 149, Roseobacter litoralis str. Och 149, Roseobacter litoralis strain Och 149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.