STRINGSTRING
PBAL39_00025 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00025" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00025Uncharacterized protein (1333 aa)    
Predicted Functional Partners:
PBAL39_00015
Uncharacterized protein (267 aa)
 
          0.910
PBAL39_00020
Uncharacterized protein (219 aa)
 
          0.901
PBAL39_00030
Uncharacterized protein (169 aa)
              0.779
PBAL39_06821
Uncharacterized protein (148 aa)
   
          0.639
PBAL39_15219
Uncharacterized protein (414 aa)
   
          0.584
PBAL39_00035
Transcriptional regulator, AraC family protein (412 aa)
 
          0.557
PBAL39_15494
Uncharacterized protein (307 aa)
   
          0.540
PBAL39_20334
Putative outer membrane protein (582 aa)
   
          0.516
PBAL39_04204
Probable transcriptional regulator, MerR family protein (263 aa)
   
          0.485
PBAL39_06391
Uncharacterized protein (180 aa)
   
          0.478
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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