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PBAL39_00035 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00035" - Transcriptional regulator, AraC family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00035Transcriptional regulator, AraC family protein (412 aa)    
Predicted Functional Partners:
PBAL39_00015
Uncharacterized protein (267 aa)
 
          0.662
PBAL39_00040
Putative exported alpha-L-fucosidase protein (414 aa)
              0.614
PBAL39_25425
Membrane spanning protein, required for outer membrane integrity (526 aa)
   
          0.589
PBAL39_00025
Uncharacterized protein (1333 aa)
 
          0.557
PBAL39_24970
Diguanylate cyclase/phosphodiesterase (984 aa)
       
    0.512
PBAL39_19844
Tetratricopeptide TPR_2 (754 aa)
       
    0.512
PBAL39_18759
Periplasmic sensor signal transduction histidine kinase (566 aa)
       
    0.512
PBAL39_13902
Possible sensor protein (663 aa)
       
    0.512
PBAL39_13035
Tetratricopeptide TPR_2 (720 aa)
       
    0.512
PBAL39_03969
Putative transmembrane protein (379 aa)
       
    0.512
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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