STRINGSTRING
PBAL39_00250 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00250" - Nuclease inhibitor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00250Nuclease inhibitor (149 aa)    
Predicted Functional Partners:
PBAL39_02875
DinB (165 aa)
   
          0.697
PBAL39_11797
IG hypothetical 18565 (167 aa)
   
          0.675
PBAL39_17319
Uncharacterized protein (166 aa)
   
          0.635
PBAL39_00255
RNA polymerase, sigma-E factor heat shock and oxidative stress (190 aa)
              0.587
PBAL39_00245
Uncharacterized protein (259 aa)
              0.538
PBAL39_21270
DinB (145 aa)
   
          0.534
PBAL39_06516
Lysine exporter protein (LYSE/YGGA) (207 aa)
   
          0.468
PBAL39_08776
Uncharacterized protein (110 aa)
   
          0.450
PBAL39_14879
RNA polymerase, sigma-24 subunit, ECF subfamily protein (145 aa)
   
          0.440
PBAL39_18039
Uncharacterized protein (600 aa)
   
          0.432
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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