STRINGSTRING
PBAL39_00270 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00270" - Putative TonB-linked outer membrane receptor protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00270Putative TonB-linked outer membrane receptor protein (1103 aa)    
Predicted Functional Partners:
PBAL39_00275
Putative outer membrane protein (559 aa)
 
          0.961
PBAL39_00280
Probable xanthan lyase (667 aa)
 
          0.864
PBAL39_13315
Putative outer membrane protein (512 aa)
 
          0.791
PBAL39_16439
Uncharacterized protein (544 aa)
 
 
      0.786
PBAL39_03779
Uncharacterized protein (474 aa)
 
          0.780
PBAL39_16776
Putative outer membrane protein (516 aa)
   
          0.778
PBAL39_15104
Putative outer membrane protein (453 aa)
   
          0.778
PBAL39_13939
Putative outer membrane protein (565 aa)
 
          0.777
PBAL39_18959
Putative outer membrane protein (522 aa)
   
          0.777
PBAL39_22832
Putative outer membrane protein (543 aa)
   
          0.776
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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