STRINGSTRING
PBAL39_00300 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00300" - TonB-dependent siderophore receptor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00300TonB-dependent siderophore receptor (813 aa)    
Predicted Functional Partners:
PBAL39_00305
Uncharacterized protein (393 aa)
 
        0.883
PBAL39_16651
Uncharacterized protein (449 aa)
 
        0.801
PBAL39_07785
Uncharacterized protein (448 aa)
 
        0.796
PBAL39_13994
Uncharacterized protein (371 aa)
 
        0.752
PBAL39_03329
Cytoplasmic membrane protein (363 aa)
 
        0.738
PBAL39_00310
Uncharacterized protein (60 aa)
              0.709
PBAL39_20725
ABC-type Fe3+-siderophores transport system (264 aa)
 
 
  0.692
PBAL39_00085
Outer membrane receptor ragA protein (602 aa)
   
          0.656
PBAL39_25010
Uncharacterized protein (667 aa)
   
          0.636
PBAL39_20960
Putative outer membrane protein (1104 aa)
   
          0.631
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]