STRINGSTRING
PBAL39_00330 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00330" - Beta-lactamase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00330Beta-lactamase (491 aa)    
Predicted Functional Partners:
PBAL39_17359
Beta-lactamase (550 aa)
   
     
  0.776
PBAL39_14189
Putative beta-lactamase (490 aa)
   
     
  0.768
PBAL39_22932
Serine-type D-Ala-D-Ala carboxypeptidase (334 aa)
   
     
  0.758
PBAL39_00335
Uncharacterized protein (81 aa)
              0.665
PBAL39_08916
Beta-N-acetylglucosaminidase (604 aa)
   
     
  0.567
PBAL39_00325
Uncharacterized protein (165 aa)
              0.546
PBAL39_07355
Beta-lactamase (364 aa)
   
          0.481
PBAL39_00340
Putative alpha-xylosidase (850 aa)
              0.468
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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