STRINGSTRING
PBAL39_00385 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00385" - Pyridoxal phosphate-dependent amino acid decarboxylase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00385Pyridoxal phosphate-dependent amino acid decarboxylase (419 aa)    
Predicted Functional Partners:
PBAL39_05936
L-lysine aminotransferase (401 aa)
 
  0.885
PBAL39_01842
Aldehyde-alcohol dehydrogenase (876 aa)
     
  0.871
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
     
 
  0.854
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (959 aa)
     
 
  0.852
PBAL39_04683
Bifunctional protein- aspartokinase I homoserine dehydrogenase (815 aa)
         
  0.839
hisI
Histidine biosynthesis bifunctional protein HisIE (196 aa)
       
    0.838
PBAL39_20044
Histidine ammonia-lyase (523 aa)
   
 
    0.766
PBAL39_18299
Putative aspartate aminotransferase (397 aa)
 
   
  0.739
PBAL39_17669
Putative transmembrane PAP2-family protein (178 aa)
     
  0.690
nnrD
ADP-dependent NAD(P)HX dehydratase ; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (312 aa)
   
        0.689
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (10%) [HD]