STRINGSTRING
PBAL39_00400 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00400" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00400Uncharacterized protein (120 aa)    
Predicted Functional Partners:
PBAL39_16836
Uncharacterized protein (1080 aa)
   
          0.656
PBAL39_00405
Transcriptional regulator, AraC family protein (286 aa)
              0.606
PBAL39_22345
Outer membrane efflux protein (457 aa)
   
          0.544
PBAL39_04418
Uncharacterized protein (1071 aa)
   
          0.501
PBAL39_14584
Sensor histidine kinase/response regulator (359 aa)
   
          0.452
PBAL39_14574
Two-component system response regulator (299 aa)
   
          0.444
PBAL39_19679
Uncharacterized protein (1046 aa)
   
          0.443
PBAL39_04413
Putative outer membrane protein (596 aa)
   
          0.437
PBAL39_00410
Deaminase (428 aa)
              0.420
PBAL39_01092
Uncharacterized protein (635 aa)
   
          0.407
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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