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EDM38100.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38100.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38100.1Uncharacterized protein; COG0679 Predicted permeases (304 aa)    
Predicted Functional Partners:
EDM37095.1
COG0281 Malic enzyme (767 aa)
       
  0.891
EDM38099.1
Putative AraC-family regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins (283 aa)
              0.572
EDM38101.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family (279 aa)
              0.555
EDM35106.1
annotation not available (212 aa)
   
          0.425
EDM37289.1
Putative iron transport/utilisation related protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases (242 aa)
   
          0.406
EDM38102.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins (328 aa)
              0.400
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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