STRINGSTRING
PBAL39_00902 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00902" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00902Uncharacterized protein (256 aa)    
Predicted Functional Partners:
PBAL39_00897
Putative aminodeoxychorismate lyase (351 aa)
 
          0.761
ddl
D-alanylalanine synthetase ; Cell wall formation (335 aa)
       
    0.741
murF
D-alanyl-D-alanine-adding enzyme ; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein (433 aa)
 
   
    0.673
PBAL39_00892
Probable thioesterase (135 aa)
              0.671
PBAL39_22010
Cell division protein, penicillin-binding protein (700 aa)
   
          0.590
PBAL39_00887
Uncharacterized protein (329 aa)
              0.558
PBAL39_07155
Cell shape protein MreC ; Involved in formation and maintenance of cell shape (278 aa)
   
          0.543
PBAL39_23983
Cell division protein FtsX (292 aa)
   
          0.520
PBAL39_10376
Cyanophycin synthetase (871 aa)
       
    0.472
PBAL39_21975
Cell division protein FtsQ (362 aa)
   
          0.464
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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