STRINGSTRING
pnp protein (Pedobacter sp. BAL39) - STRING interaction network
"pnp" - Polynucleotide phosphorylase in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
pnpPolynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (715 aa)    
Predicted Functional Partners:
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1267 aa)
   
  0.945
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1428 aa)
   
 
  0.927
rpoA
Transcriptase subunit alpha ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (330 aa)
   
  0.924
PBAL39_10541
Ribonuclease G (503 aa)
   
  0.888
PBAL39_12152
Pyruvate kinase (476 aa)
   
 
  0.880
PBAL39_22060
Adenylate kinase ; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP (189 aa)
     
 
  0.877
PBAL39_10626
Uridylate kinase ; Catalyzes the reversible phosphorylation of UMP to UDP (235 aa)
   
 
  0.877
PBAL39_08105
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (792 aa)
     
 
  0.864
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (139 aa)
   
 
  0.858
cmk
Cytidine monophosphate kinase (225 aa)
   
 
  0.857
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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