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PBAL39_00942 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_00942" - Multidrug resistance ABC transporter in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_00942Multidrug resistance ABC transporter (587 aa)    
Predicted Functional Partners:
PBAL39_00937
Putative ABC transport system, ATP-binding protein (581 aa)
 
       
0.902
PBAL39_01667
Sugar phosphate isomerase, KpsF/GutQ family protein (321 aa)
 
  0.879
PBAL39_09096
Putative ABC transporter ATP-binding protein (275 aa)
   
  0.723
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
   
 
  0.697
PBAL39_11662
ABC transporter, ATP-binding protein (205 aa)
   
  0.697
PBAL39_21145
Molybdenum ABC transporter, ATP-binding protein (209 aa)
 
   
    0.695
PBAL39_08025
ABC transporter, ATP-binding protein (256 aa)
 
  0.694
PBAL39_21695
ABC-type multidrug transporter, ATP-binding protein gliding motility-associated protein (235 aa)
 
  0.677
PBAL39_20730
ABC transporter, ATPase subunit (229 aa)
 
  0.660
PBAL39_18179
Hemin ABC transporter ATP binding protein (265 aa)
   
    0.660
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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