STRINGSTRING
PBAL39_01022 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01022" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01022Uncharacterized protein (893 aa)    
Predicted Functional Partners:
PBAL39_01007
ABC transporter-related permease with MCE domain (306 aa)
 
          0.851
PBAL39_01027
CinA-like protein (415 aa)
              0.848
PBAL39_01017
Putative exported N-acetylmuramoyl-L-alanine amidase (300 aa)
 
          0.801
PBAL39_08851
Uncharacterized protein (802 aa)
 
          0.788
PBAL39_09866
Uncharacterized protein (166 aa)
   
          0.778
PBAL39_11562
Uncharacterized protein (542 aa)
   
          0.776
PBAL39_06541
Putative cationic 19 kDa outer membrane protein (176 aa)
   
          0.776
PBAL39_05483
Putative outer membrane protein (431 aa)
   
          0.776
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.774
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.773
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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