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PBAL39_01182 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01182" - Putative RNA polymerase ECF-type sigma factor in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01182Putative RNA polymerase ECF-type sigma factor (184 aa)    
Predicted Functional Partners:
PBAL39_01187
Permease (436 aa)
              0.738
PBAL39_01192
Oxidoreductase (242 aa)
              0.668
PBAL39_13954
RNA polymerase ECF-type sigma factor (280 aa)
   
          0.642
PBAL39_20314
RNA polymerase ECF-type sigma factor (196 aa)
   
          0.581
PBAL39_01177
Uncharacterized protein (230 aa)
              0.496
thrS
Threonyl-tRNA synthetase (641 aa)
              0.423
PBAL39_07230
Putative anti-sigma factor (325 aa)
   
          0.415
PBAL39_01202
Translation initiation factor IF-3 ; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (189 aa)
              0.412
PBAL39_01172
ATP-dependent DNA helicase recQ (630 aa)
              0.408
PBAL39_16786
Putative anti-sigma factor (338 aa)
   
          0.403
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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