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PBAL39_01187 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01187" - Permease in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01187Permease (436 aa)    
Predicted Functional Partners:
PBAL39_01192
Oxidoreductase (242 aa)
              0.778
PBAL39_01182
Putative RNA polymerase ECF-type sigma factor (184 aa)
              0.738
thrS
Threonyl-tRNA synthetase (641 aa)
              0.481
PBAL39_01202
Translation initiation factor IF-3 ; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (189 aa)
              0.467
PBAL39_01177
Uncharacterized protein (230 aa)
              0.436
rpmI
50S ribosomal protein L35 (66 aa)
              0.425
PBAL39_04798
Uncharacterized protein (194 aa)
   
          0.416
PBAL39_01172
ATP-dependent DNA helicase recQ (630 aa)
              0.409
PBAL39_06006
Uncharacterized protein (89 aa)
   
          0.400
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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