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rplT protein (Pedobacter sp. BAL39) - STRING interaction network
"rplT" - 50S ribosomal protein L20 in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rplT50S ribosomal protein L20 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (114 aa)    
Predicted Functional Partners:
rpmA
50S ribosomal protein L27 (139 aa)
   
  0.997
rplS
50S ribosomal protein L19 ; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (115 aa)
 
  0.997
rpmI
50S ribosomal protein L35 (66 aa)
   
  0.997
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (209 aa)
 
  0.997
rplM
50S ribosomal protein L13 ; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (147 aa)
 
  0.996
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (205 aa)
 
  0.996
rplQ
50S ribosomal protein L17 (179 aa)
 
  0.996
rplX
50S ribosomal protein L24 ; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (112 aa)
 
  0.996
rplK
50S ribosomal protein L11 ; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors (147 aa)
   
  0.995
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (232 aa)
   
  0.995
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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