STRINGSTRING
PBAL39_01247 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01247" - Putative cell surface protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01247Putative cell surface protein (366 aa)    
Predicted Functional Partners:
PBAL39_01242
Uncharacterized protein (371 aa)
          0.980
PBAL39_03414
Uncharacterized protein (378 aa)
          0.947
PBAL39_03409
Outer membrane vitamin B12 receptor protein (670 aa)
 
          0.855
PBAL39_04568
Conserved transmembrane protein found in conjugative transposon (393 aa)
   
          0.689
PBAL39_04583
Conjugative transposon protein TraI (220 aa)
   
          0.623
PBAL39_04563
Uncharacterized protein (212 aa)
   
          0.617
PBAL39_24268
Uncharacterized protein (218 aa)
   
          0.580
PBAL39_23988
Uncharacterized protein (73 aa)
   
          0.578
PBAL39_24273
Putative transcriptional regulator GerE, LuxR family protein (254 aa)
   
          0.575
PBAL39_04593
Conserved protein found in conjugate transposon (514 aa)
   
          0.575
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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