STRINGSTRING
PBAL39_01292 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01292" - Putative regulatory protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01292Putative regulatory protein (190 aa)    
Predicted Functional Partners:
PBAL39_25085
Transcriptional regulator, AraC family protein (285 aa)
   
          0.641
PBAL39_00752
Putative AraC-family regulatory protein (283 aa)
   
          0.633
PBAL39_01287
Drug resistance transporter, Bcr/CflA family protein (409 aa)
              0.602
PBAL39_18154
Transcriptional regulator, AraC family protein (331 aa)
   
          0.597
PBAL39_25015
Transcriptional regulator, AraC family protein (271 aa)
   
          0.583
PBAL39_01312
Stress response protein (204 aa)
              0.560
PBAL39_01307
Stress protein (184 aa)
              0.560
PBAL39_01302
Uncharacterized protein (278 aa)
              0.560
PBAL39_01297
Putative dehalogenase-hydrolase (231 aa)
              0.560
PBAL39_12187
Possible TonB-dependent receptor (796 aa)
   
          0.523
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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