STRINGSTRING
PBAL39_01297 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01297" - Putative dehalogenase-hydrolase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01297Putative dehalogenase-hydrolase (231 aa)    
Predicted Functional Partners:
PBAL39_01312
Stress response protein (204 aa)
 
          0.919
PBAL39_01317
Tellurite resistance protein, putative (365 aa)
 
          0.908
PBAL39_01307
Stress protein (184 aa)
 
          0.892
PBAL39_01302
Uncharacterized protein (278 aa)
              0.880
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.766
PBAL39_09391
Uncharacterized protein (270 aa)
   
          0.761
PBAL39_10276
Putative outer membrane protein (1227 aa)
   
          0.750
PBAL39_01322
Uncharacterized protein (320 aa)
              0.748
PBAL39_18644
Uncharacterized protein (487 aa)
   
          0.739
PBAL39_16519
Putative outer membrane protein (928 aa)
   
          0.729
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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