STRINGSTRING
PBAL39_01312 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01312" - Stress response protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01312Stress response protein (204 aa)    
Predicted Functional Partners:
PBAL39_01307
Stress protein (184 aa)
     
0.974
PBAL39_01297
Putative dehalogenase-hydrolase (231 aa)
 
          0.919
PBAL39_01302
Uncharacterized protein (278 aa)
              0.865
PBAL39_01317
Tellurite resistance protein, putative (365 aa)
 
          0.848
PBAL39_01327
Membrane protein, TerC family (330 aa)
 
     
  0.769
PBAL39_01322
Uncharacterized protein (320 aa)
              0.746
PBAL39_01292
Putative regulatory protein (190 aa)
              0.560
PBAL39_00420
Uncharacterized protein (240 aa)
 
          0.522
PBAL39_21660
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
       
    0.513
PBAL39_01287
Drug resistance transporter, Bcr/CflA family protein (409 aa)
              0.410
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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