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PBAL39_01337 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01337" - Metallo-beta-lactamase superfamily protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01337Metallo-beta-lactamase superfamily protein (460 aa)    
Predicted Functional Partners:
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1428 aa)
     
    0.734
PBAL39_16896
ATP-dependent DNA ligase (908 aa)
   
  0.733
PBAL39_18274
DNA ligase (530 aa)
   
  0.727
PBAL39_01347
Stress protein, member of the CspA-family (68 aa)
   
 
    0.724
PBAL39_12007
DNA polymerase I (937 aa)
     
  0.682
PBAL39_01342
Uncharacterized protein (284 aa)
   
        0.658
PBAL39_11120
Metallophosphoesterase (245 aa)
   
    0.616
PBAL39_11115
Putative phosphoesterase (256 aa)
   
    0.616
PBAL39_23562
Possible ATP-dependent RNA helicase (435 aa)
   
    0.607
PBAL39_21615
Possible ATP-dependent RNA helicase (443 aa)
   
    0.607
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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