STRINGSTRING
PBAL39_01407 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01407" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01407Uncharacterized protein (506 aa)    
Predicted Functional Partners:
PBAL39_01417
Putative capsule-related protein (384 aa)
 
          0.934
PBAL39_01422
Glycosyl transferase, group 1 (418 aa)
 
          0.912
PBAL39_01402
Lipopolysaccharide biosynthesis (720 aa)
 
          0.902
PBAL39_01392
Putative glycosyltransferase (353 aa)
 
          0.794
PBAL39_01497
Putative transmembrane glycosyltransferase (389 aa)
 
          0.790
PBAL39_01427
Putative acetyl transferase (204 aa)
 
          0.772
PBAL39_01412
Uncharacterized protein (36 aa)
              0.748
PBAL39_09606
Uncharacterized protein (100 aa)
   
          0.735
PBAL39_01492
Putative glycosyltransferase (303 aa)
 
          0.720
PBAL39_01387
Putative two-component system response regulator (135 aa)
 
          0.714
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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