STRINGSTRING
PBAL39_01417 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01417" - Putative capsule-related protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01417Putative capsule-related protein (384 aa)    
Predicted Functional Partners:
PBAL39_01422
Glycosyl transferase, group 1 (418 aa)
 
          0.969
PBAL39_01407
Uncharacterized protein (506 aa)
 
          0.934
PBAL39_01427
Putative acetyl transferase (204 aa)
 
          0.895
PBAL39_01402
Lipopolysaccharide biosynthesis (720 aa)
 
          0.889
PBAL39_13757
Predicted xylanase/chitin deacetilase (295 aa)
 
   
  0.874
PBAL39_13752
Uncharacterized protein (295 aa)
 
   
  0.864
PBAL39_02452
HAD-superfamily hydrolase, subfamily IIB (733 aa)
     
 
    0.839
PBAL39_08175
Putative polysaccharide deacetylase (205 aa)
   
   
  0.818
PBAL39_01432
Glycosyltransferase involved in cell wall biogenesis (276 aa)
 
          0.792
PBAL39_01412
Uncharacterized protein (36 aa)
              0.767
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]