STRINGSTRING
PBAL39_01562 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01562" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01562Uncharacterized protein (286 aa)    
Predicted Functional Partners:
PBAL39_01567
Deacetylase (299 aa)
              0.862
PBAL39_01572
Putative transposon excision protein (631 aa)
              0.859
kynU
L-kynurenine hydrolase ; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively (449 aa)
              0.706
PBAL39_01547
GAF domain-containing protein involved in signal transduction (158 aa)
              0.693
PBAL39_01552
Putative 3-methyladenine DNA glycosylase (208 aa)
              0.687
PBAL39_01587
Isopentenyl-diphosphate-tRNA isopentenyltransferase ; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (309 aa)
              0.648
PBAL39_01582
Uncharacterized protein (272 aa)
              0.648
PBAL39_01577
Response regulator receiver (121 aa)
              0.648
PBAL39_01542
Uncharacterized protein (722 aa)
              0.523
PBAL39_15469
Uncharacterized protein (127 aa)
   
          0.474
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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