STRINGSTRING
PBAL39_01612 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01612" - Xanthosine permease in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01612Xanthosine permease (422 aa)    
Predicted Functional Partners:
PBAL39_01617
Uncharacterized protein (205 aa)
              0.899
PBAL39_01622
Electron transfer flavoprotein, alpha subunit (323 aa)
              0.704
PBAL39_01627
Electron transfer flavoprotein, beta subunit (245 aa)
              0.595
PBAL39_03854
Uncharacterized protein (351 aa)
 
          0.560
PBAL39_05753
TPR repeat-containing protein (571 aa)
   
          0.491
PBAL39_05778
Uncharacterized protein (204 aa)
   
          0.487
PBAL39_01632
Tetratricopeptide repeat domain protein (111 aa)
              0.460
PBAL39_05773
Uncharacterized protein (179 aa)
   
          0.454
PBAL39_03839
Twin-arginine translocation pathway signal (219 aa)
 
          0.443
PBAL39_00080
Putative outer membrane protein (491 aa)
   
          0.412
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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