STRINGSTRING
PBAL39_01707 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01707" - Probable copper homeostasis protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01707Probable copper homeostasis protein (234 aa)    
Predicted Functional Partners:
PBAL39_01712
Asparaginase (343 aa)
 
          0.828
nagA
N-acetylglucosamine-6-phosphate deacetylase (373 aa)
 
          0.635
PBAL39_00040
Putative exported alpha-L-fucosidase protein (414 aa)
 
          0.630
PBAL39_14999
Calx-beta domain protein (501 aa)
 
          0.619
PBAL39_06441
Beta-hexosaminidase (791 aa)
 
          0.613
PBAL39_14164
Probable glycosyl hydrolase (547 aa)
 
          0.603
PBAL39_05448
Alpha-L-fucosidase, putative (713 aa)
 
          0.601
lepA
Ribosomal back-translocase LepA ; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (595 aa)
              0.599
PBAL39_25060
Beta-hexosaminidase (633 aa)
 
          0.597
PBAL39_06176
Beta-hexosaminidase (552 aa)
 
          0.597
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (10%) [HD]