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PBAL39_01792 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01792" - ABC transporter permease in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01792ABC transporter permease (416 aa)    
Predicted Functional Partners:
PBAL39_01797
Putative exported outer membrane protein (502 aa)
 
          0.969
PBAL39_01807
Putative permease component of ABC transporter (412 aa)
 
          0.944
PBAL39_01812
ABC transporter permease (395 aa)
 
          0.933
PBAL39_01822
Two-component system sensor histidine kinase (420 aa)
 
          0.920
PBAL39_01802
Putative ABC transport system ATP-binding protein (221 aa)
 
          0.877
PBAL39_01817
Two-component system response regulator (457 aa)
 
          0.745
PBAL39_19514
Membrane-fusion protein (330 aa)
   
          0.654
PBAL39_20735
Putative FtsX-related transmembrane transport protein (796 aa)
   
          0.582
PBAL39_20745
Putative ABC transporter permease (794 aa)
 
          0.565
PBAL39_15989
Putative transporter permease protein (791 aa)
   
          0.560
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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