STRINGSTRING
EDM38322.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38322.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38322.1annotation not available (214 aa)    
Predicted Functional Partners:
EDM37446.1
PKD; COG3291 FOG- PKD repeat (1990 aa)
   
          0.724
EDM34855.1
annotation not available (674 aa)
   
          0.692
EDM38934.1
annotation not available (159 aa)
   
          0.691
EDM34817.1
Probable periplasmic binding protein possible mechanosensitive ion channel component; COG0419 ATPase involved in DNA repair (767 aa)
   
          0.682
EDM34309.1
annotation not available (394 aa)
   
          0.674
EDM38579.1
annotation not available (98 aa)
   
          0.610
EDM35173.1
COG1629 Outer membrane receptor proteins, mostly Fe transport (1160 aa)
   
          0.607
EDM37150.1
annotation not available (410 aa)
   
          0.599
EDM37447.1
annotation not available (309 aa)
   
          0.590
EDM35586.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (986 aa)
   
          0.584
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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