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PBAL39_01957 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01957" - WBPS in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01957WBPS (611 aa)    
Predicted Functional Partners:
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
   
 
  0.948
PBAL39_04683
Bifunctional protein- aspartokinase I homoserine dehydrogenase (815 aa)
   
 
  0.945
PBAL39_01952
Putative LPS biosynthesis related glycosyltransferase (357 aa)
 
   
  0.939
PBAL39_12052
Argininosuccinate synthase (397 aa)
     
  0.929
PBAL39_19295
Aspartokinase (424 aa)
   
 
  0.918
PBAL39_17479
Aspartokinase (437 aa)
   
 
  0.918
PBAL39_01962
Putative udp-glucuronic acid epimerase (369 aa)
 
     
  0.884
purA
IMP--aspartate ligase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (425 aa)
   
 
  0.864
PBAL39_01932
Glycosyl transferase, group 1 (384 aa)
 
   
  0.857
pyrB
Aspartate transcarbamylase (310 aa)
   
 
  0.854
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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