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EDM38340.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38340.1" - WBPS in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38340.1WBPS; COG0367 Asparagine synthase (glutamine-hydrolyzing) (611 aa)    
Predicted Functional Partners:
EDM38339.1
Putative LPS biosynthesis related glycosyltransferase; COG0438 Glycosyltransferase (357 aa)
 
        0.915
EDM36437.1
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily (397 aa)
     
  0.877
EDM38341.1
Putative udp-glucuronic acid epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases (369 aa)
 
     
  0.865
EDM38369.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1 (1182 aa)
   
 
  0.831
EDM34468.1
COG0527 Aspartokinases; Belongs to the aspartokinase family (424 aa)
   
 
  0.819
EDM34249.1
COG0527 Aspartokinases; Belongs to the aspartokinase family (437 aa)
   
 
  0.807
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family (425 aa)
     
 
    0.791
EDM38335.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase (384 aa)
 
        0.785
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the ATCase/OTCase family (310 aa)
   
 
  0.783
EDM36852.1
Aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase (397 aa)
     
 
  0.780
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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