STRINGSTRING
PBAL39_01997 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_01997" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_01997Uncharacterized protein (347 aa)    
Predicted Functional Partners:
PBAL39_01987
Uncharacterized protein (324 aa)
 
          0.889
PBAL39_01992
Acetyltransferase, GNAT family protein (169 aa)
              0.862
PBAL39_01982
Phytanoyl-CoA dioxygenase (267 aa)
 
          0.832
PBAL39_02002
Capsular polysaccharide biosynthesis protein CapD (633 aa)
              0.812
PBAL39_01972
Glycosyl transferase (411 aa)
 
          0.761
PBAL39_01977
Uncharacterized protein (347 aa)
 
       
0.719
PBAL39_02007
Sensory box histidine kinase/response regulator (345 aa)
              0.573
PBAL39_17189
Uncharacterized protein (396 aa)
   
          0.549
PBAL39_10116
Uncharacterized protein (258 aa)
   
          0.505
PBAL39_15494
Uncharacterized protein (307 aa)
   
          0.491
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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