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PBAL39_02112 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02112" - Putative SpoU rRNA methylase family protein in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02112Putative SpoU rRNA methylase family protein (219 aa)    
Predicted Functional Partners:
PBAL39_03709
Putative RNA methyltransferase (487 aa)
 
 
  0.695
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (709 aa)
 
    0.694
PBAL39_25405
Serine O-acetyltransferase (270 aa)
   
        0.693
PBAL39_02117
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (345 aa)
              0.634
PBAL39_02122
Dithiol-disulfide isomerase (214 aa)
              0.632
rplT
50S ribosomal protein L20 ; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (114 aa)
 
 
  0.603
PBAL39_17874
Uncharacterized protein (220 aa)
   
  0.571
PBAL39_10671
Putative methyltransferase (230 aa)
   
  0.571
PBAL39_08280
Uncharacterized protein (401 aa)
   
  0.571
PBAL39_08821
Pseudouridine synthase (463 aa)
 
      0.564
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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