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PBAL39_02142 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02142" - Putative TonB-linked outer membrane protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02142Putative TonB-linked outer membrane protein (985 aa)    
Predicted Functional Partners:
PBAL39_23893
Uncharacterized protein (524 aa)
   
          0.747
PBAL39_07195
Uncharacterized protein (397 aa)
   
          0.680
PBAL39_05578
Tricorn protease homolog ; Degrades oligopeptides (1073 aa)
   
          0.670
PBAL39_14879
RNA polymerase, sigma-24 subunit, ECF subfamily protein (145 aa)
   
          0.663
PBAL39_18039
Uncharacterized protein (600 aa)
   
          0.661
PBAL39_16439
Uncharacterized protein (544 aa)
   
          0.654
PBAL39_07340
Possible TonB-dependent receptor (795 aa)
   
          0.648
PBAL39_02127
Putative two-component system sensor protein histidine kinase (362 aa)
 
          0.641
PBAL39_02820
Putative HlyD-family transporter (435 aa)
   
          0.628
PBAL39_06371
Uncharacterized protein (157 aa)
   
          0.623
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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