STRINGSTRING
PBAL39_02177 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02177" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02177Uncharacterized protein (360 aa)    
Predicted Functional Partners:
gyrA
DNA gyrase subunit A ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (869 aa)
              0.829
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.770
PBAL39_08851
Uncharacterized protein (802 aa)
   
          0.765
PBAL39_09891
PKD (1990 aa)
   
          0.760
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.752
PBAL39_06106
TPR repeat (208 aa)
   
          0.749
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.748
PBAL39_17554
CHU large protein uncharacterized (1602 aa)
   
          0.744
PBAL39_17569
CHU large protein glucose/sorbosone dehydrogenase-related (1367 aa)
   
          0.743
PBAL39_06496
Uncharacterized protein (399 aa)
   
          0.741
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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