STRINGSTRING
PBAL39_02192 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02192" - OsmC-like protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02192OsmC-like protein (136 aa)    
Predicted Functional Partners:
PBAL39_02452
HAD-superfamily hydrolase, subfamily IIB (733 aa)
     
   
  0.690
PBAL39_02187
Uncharacterized protein (718 aa)
   
        0.686
PBAL39_19240
Ferritin-like DNA-binding protein (159 aa)
   
   
  0.476
PBAL39_16996
Starvation-inducible DNA-binding protein (157 aa)
   
   
  0.476
PBAL39_18569
YfmJ (331 aa)
   
        0.451
PBAL39_05898
Peptide-methionine (S)-S-oxide reductase ; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (326 aa)
     
   
  0.441
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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