STRINGSTRING
PBAL39_02302 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02302" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02302Putative outer membrane protein (1859 aa)    
Predicted Functional Partners:
PBAL39_02307
Putative penicillin-binding protein (798 aa)
 
   
  0.974
PBAL39_06821
Uncharacterized protein (148 aa)
   
          0.650
PBAL39_09951
Uncharacterized protein (109 aa)
   
          0.643
PBAL39_11907
Uncharacterized protein (449 aa)
   
          0.634
PBAL39_10176
Uncharacterized protein (430 aa)
   
          0.600
PBAL39_02297
Uncharacterized protein (134 aa)
 
          0.598
PBAL39_12207
Uncharacterized protein (213 aa)
   
          0.573
PBAL39_09391
Uncharacterized protein (270 aa)
   
          0.540
PBAL39_06131
Putative transcriptional regulator, TetR family protein (196 aa)
   
          0.540
PBAL39_08671
Uncharacterized protein (206 aa)
   
          0.535
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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