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EDM38425.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38425.1" - Oxidoreductase domain protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38425.1Oxidoreductase domain protein; COG0673 Predicted dehydrogenases and related proteins (452 aa)    
Predicted Functional Partners:
EDM38424.1
annotation not available (452 aa)
 
 
  0.959
EDM38423.1
annotation not available (348 aa)
 
          0.945
EDM38426.1
COG0673 Predicted dehydrogenases and related proteins (399 aa)
 
       
0.871
EDM36067.1
Oxidoreductase domain protein; COG0673 Predicted dehydrogenases and related proteins (360 aa)
   
          0.648
EDM36069.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose (486 aa)
   
          0.567
EDM37630.1
COG1082 Sugar phosphate isomerases/epimerases (288 aa)
   
 
  0.540
EDM35649.1
Uncharacterized protein; COG0303 Molybdopterin biosynthesis enzyme (230 aa)
   
          0.540
EDM37422.1
Uncharacterized protein; COG2755 Lysophospholipase L1 and related esterases (221 aa)
   
          0.533
EDM34328.1
annotation not available (812 aa)
   
        0.525
EDM35651.1
Twin-arginine translocation pathway signal; COG3622 Hydroxypyruvate isomerase (293 aa)
 
        0.511
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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