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PBAL39_02437 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_02437" - ABC transporter related protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_02437ABC transporter related protein (229 aa)    
Predicted Functional Partners:
PBAL39_02432
Putative permease domain protein (864 aa)
 
   
  0.971
PBAL39_02442
Lipase/Acylhydrolase (222 aa)
 
        0.925
PBAL39_02427
Uncharacterized protein (129 aa)
              0.859
tsaD
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (333 aa)
   
          0.670
PBAL39_02447
Uncharacterized protein (152 aa)
              0.609
PBAL39_03989
ABC transporter, permease protein (406 aa)
          0.588
PBAL39_03287
ABC transporter protein (213 aa)
   
          0.555
PBAL39_02422
Uncharacterized protein (247 aa)
              0.492
PBAL39_01807
Putative permease component of ABC transporter (412 aa)
          0.484
PBAL39_03639
ABC transporter efflux protein (410 aa)
          0.457
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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