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EDM38445.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM38445.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM38445.1Uncharacterized protein; COG5295 Autotransporter adhesin (192 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (937 aa)
         
  0.799
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
     
 
  0.693
EDM34101.1
annotation not available (115 aa)
   
          0.685
EDM36695.1
4-alpha-glucanotransferase; COG3280 Maltooligosyl trehalose synthase (1344 aa)
       
  0.684
EDM38711.1
Uncharacterized protein; COG1009 NADH-ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit (141 aa)
   
          0.675
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
   
  0.639
EDM37224.1
annotation not available (176 aa)
   
          0.626
EDM36850.1
Uncharacterized protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes (146 aa)
   
 
      0.604
EDM38444.1
annotation not available (166 aa)
              0.596
EDM36875.1
COG0847 DNA polymerase III, epsilon subunit and related 3’-5’ exonucleases (456 aa)
     
 
    0.594
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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